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7 Nov 2013 Version 2.3: RNA one-bead model added, additional nonbonded potentials (double well, piecewise Morse-barrier, tabularized potential), changes to manual & examples

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2 Jul 2013     bugfix: restart file writing

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3 Nov 2010      cosmetic changes

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19 May 2010     bugfix: DNA_NLMORSE potential

                        bugfix: RedMD_prevModel

                        add BOND_HARM tag

                        add spell check for 'inp' file

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12 May 2010     bugfix: BetaA40 model

                        force field generators are now replaced with a single, general module

                        support for MPI was added

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16 Apr 2010      version 2.1 - a bugfix revision - is now available

                        the source code has also been tuned for performance

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12 Feb 2010      cosmetic changes



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15 Nov 2009     fixed bug in the RedGNM module



09 Nov 2009     version 2.0 is now available:



                       -L-BFGS



                       -Monte Carlo conformational search



                       - tool for trajectory analysis



                       - Beta_A40 force field - force field based on two-bead mapping,

                       applicable to small proteins



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31 Aug 2009     version 1.3 is now available:

                

                       - DNA force field

                

                       - containing sphere external field

                

                       - Modified Gaussian Network Model for Normal Mode Analysis (RedGNM)

                

                       - updated manual

                

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20 Feb 2008     version 1.2 is now available:



                       - implementation of electrostatic interactions (Coulombic terms with a distance-dependent dielectric constant)



                       - fixed bug - nonlocal morse potentials settings



                       - fixed bug - writing of atoms' serial numbers to output PDB files



                       - fixed bug - reading of PDB files without the last two columns is now possible



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02 Nov 2008:     version 1.1 is now available:



                         - only the source code is distributed



                         - REACH model added



                         - Normal Mode Analysis (NMA) module added



                         - updated manual



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23 Sep 2008:   - updated examples (Nucleosome Model)



                      - updated manual



                      - the nucleosome model is now fully functional

                        and secondary structure-dependent potential terms

                        are now included correctly (there was a bug in the previous release);

                        affected source files:

                                        potential/utils_mol.cpp

                                        fieldutils/makegenericmodel.h

                                        fieldutils/RedMD_extractPDB.cpp

                                        fieldutils/RedMD_genModel_Nucl.cpp